Neurosciences
Translational Bioinformatics
Xavier de la Cruz
Researchers in training
Casandra Riera , Òscar Marin, Eleva Álvarez de la Campa
Nursing, Technical and Administrative Staff
Natàlia Padilla , Sergio Lois
SUMMARY
The Translational Bioinformatics group has developed its activities with two different goals: increase the applicability of bioinformatics tools and contribute to the diffusion of genomics among the VHIR community. For the first goal, we have reinforced our research line on the scoring of pathological mutations. More precisely, we have developed an original approach for the identification of causative mutations in Fabry (Riera et al., Proteins, 2014). In parallel, we have increased our collaborations with other groups inside and outside the VHIR, with the goal of benchmarking our new bioinformatics models. Finally, we have recently started to work as bioinformatics coordinators of the benchmarking of Illumina’s TruSight Tumour Panel.
Regarding the diffusion of genomics within the VHIR community, we have acted as scientific responsibles, and co-organizers, of the meeting “The impact of genomics in translational medicine: present view” (October, 2014). In addition, we have brought to the VHIR two top speakers in genomic diagnostics and epigenetics, Dr. Belén Pérez and Dr. Marian Martínez, respectively.
PUBLICATIONS
- “Molecular damage in Fabry disease: characterization and prediction of Alpha-galactosidase A pathological mutations” Riera, C., Lois, S., Domínguez, C., Fernandez-Cadenas, I., Montaner, J., Rodríguez-Sureda, V. de la Cruz, X. Doi: 10.1002/prot.24708. Epub 2014 Nov 18.
- “Identification and characterization of a novel splice site mutation in the SERPING1 gene in a family with hereditary angioedema”, Colobran, R., Lois, S., de la Cruz, X., Pujol-Borrell, R., Hernández, M. and Guilarte, M. Clin Immunol. (2014) 150:143-148.
- “Novel and atypical splicing mutation in a compound heterozygous UNC13D defect presenting in Familial Hemophagocytic Lymphohistiocytosis triggered by EBV infection” Alsina, L., Colobran, R., de Sevilla, M.F., Català, A., Viñas, L., Ricart, S., Plaza, A.M., Lois, S., Juan, M., Pujol-Borrell, R., Martinez-Gallo, M. Clin Immunol. (2014) 153:292-297.
MAIN RESEARCH PROJECTS
ViewDesarrollo de herramientas bioinformáticas para la predicción y comprensión de dos rasgos fundamentales de las patologías hereditarias: severidad y fenotipo tisular
PI: De la Cruz Montserrat, Fco. Xavier. Ministerio de Economía y Competitividad, BIO2012-40133, 105.300 euros. Període: 2013-2015.